From 76c854e127cd792b5f74f8dc357f09fddb07998c Mon Sep 17 00:00:00 2001 From: "snakedeploy-bot[bot]" <115615832+snakedeploy-bot[bot]@users.noreply.github.com> Date: Fri, 20 Sep 2024 02:52:19 +0000 Subject: [PATCH] perf: autobump bio/lofreq/indelqual (#3261) Automatic bump of bio/lofreq/indelqual. --------- Co-authored-by: snakedeploy-bot[bot] <115615832+snakedeploy-bot[bot]@users.noreply.github.com> --- .../indelqual/environment.linux-64.pin.txt | 51 ++++++++++--------- bio/lofreq/indelqual/environment.yaml | 2 +- 2 files changed, 28 insertions(+), 25 deletions(-) diff --git a/bio/lofreq/indelqual/environment.linux-64.pin.txt b/bio/lofreq/indelqual/environment.linux-64.pin.txt index 02416a6596..9c8f6bda6b 100644 --- a/bio/lofreq/indelqual/environment.linux-64.pin.txt +++ b/bio/lofreq/indelqual/environment.linux-64.pin.txt @@ -3,40 +3,43 @@ # platform: linux-64 @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 -https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda#2f4327a1cbe7f022401b236e915a5fef -https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.40-h41732ed_0.conda#7aca3059a1729aa76c597603f10b0dd3 -https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-h7e041cc_5.conda#f6f6600d18a4047b54f803cf708b868a -https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.10-4_cp310.conda#26322ec5d7712c3ded99dd656142b8ce -https://conda.anaconda.org/conda-forge/noarch/tzdata-2024a-h0c530f3_0.conda#161081fc7cec0bfda0d86d7cb595f8d8 -https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h807b86a_5.conda#d211c42b9ce49aee3734fdc828731689 +https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.8.30-hbcca054_0.conda#c27d1c142233b5bc9ca570c6e2e0c244 +https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.40-hf3520f5_7.conda#b80f2f396ca2c28b8c14c437a4ed1e74 +https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.12-5_cp312.conda#0424ae29b104430108f5218a66db7260 +https://conda.anaconda.org/conda-forge/noarch/tzdata-2024a-h8827d51_1.conda#8bfdead4e0fff0383ae4c9c50d0531bd +https://conda.anaconda.org/conda-forge/linux-64/libgomp-14.1.0-h77fa898_1.conda#23c255b008c4f2ae008f81edcabaca89 https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2#73aaf86a425cc6e73fcf236a5a46396d -https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-13.2.0-h807b86a_5.conda#d4ff227c46917d3b4565302a2bbb276b -https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-hd590300_5.conda#69b8b6202a07720f448be700e300ccf4 -https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.28.1-hd590300_0.conda#dcde58ff9a1f30b0037a2315d1846d1f +https://conda.anaconda.org/conda-forge/linux-64/libgcc-14.1.0-h77fa898_1.conda#002ef4463dd1e2b44a94a4ace468f5d2 +https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.6.3-h5888daf_0.conda#59f4c43bb1b5ef1c71946ff2cbf59524 +https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-14.1.0-h69a702a_1.conda#1efc0ad219877a73ef977af7dbb51f17 +https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-14.1.0-hc0a3c3a_1.conda#9dbb9699ea467983ba8a4ba89b08b066 +https://conda.anaconda.org/conda-forge/linux-64/openssl-3.3.2-hb9d3cd8_0.conda#4d638782050ab6faa27275bed57e9b4e +https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h4bc722e_7.conda#62ee74e96c5ebb0af99386de58cf9553 +https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.33.1-heb4867d_0.conda#0d3c60291342c0c025db231353376dfb https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.1-h166bdaf_0.tar.bz2#30186d27e2c9fa62b45fb1476b7200e3 -https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.20-hd590300_0.conda#8e88f9389f1165d7c0936fe40d9a9a79 +https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.21-h4bc722e_0.conda#36ce76665bf67f5aac36be7a0d21b7f3 https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-hd590300_2.conda#172bf1cd1ff8629f2b1179945ed45055 https://conda.anaconda.org/conda-forge/linux-64/libffi-3.4.2-h7f98852_5.tar.bz2#d645c6d2ac96843a2bfaccd2d62b3ac3 https://conda.anaconda.org/conda-forge/linux-64/libnsl-2.0.1-hd590300_0.conda#30fd6e37fe21f86f4bd26d6ee73eeec7 +https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-14.1.0-h4852527_1.conda#bd2598399a70bb86d8218e95548d735e https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.38.1-h0b41bf4_0.conda#40b61aab5c7ba9ff276c41cfffe6b80b https://conda.anaconda.org/conda-forge/linux-64/libxcrypt-4.4.36-hd590300_1.conda#5aa797f8787fe7a17d1b0821485b5adc -https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.13-hd590300_5.conda#f36c115f1ee199da648e0597ec2047ad -https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.4.20240210-h59595ed_0.conda#97da8860a0da5413c7c98a3b3838a645 -https://conda.anaconda.org/conda-forge/linux-64/openssl-3.2.1-hd590300_1.conda#9d731343cff6ee2e5a25c4a091bf8e2a +https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.3.1-h4ab18f5_1.conda#57d7dc60e9325e3de37ff8dffd18e814 +https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.5-he02047a_1.conda#70caf8bb6cf39a0b6b7efc885f51c0fe https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.6-h166bdaf_0.tar.bz2#2161070d867d1b1204ea749c8eec4ef0 https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20191231-he28a2e2_2.tar.bz2#4d331e44109e3f0e19b4cb8f9b82f3e1 https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.58.0-h47da74e_1.conda#700ac6ea6d53d5510591c4344d5c989a -https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.45.3-h2797004_0.conda#b3316cbe90249da4f8e84cd66e1cc55b +https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.46.1-hadc24fc_0.conda#36f79405ab16bf271edb55b213836dac https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.11.0-h0841786_0.conda#1f5a58e686b13bcfde88b93f547d23fe https://conda.anaconda.org/conda-forge/linux-64/readline-8.2-h8228510_1.conda#47d31b792659ce70f470b5c82fdfb7a4 https://conda.anaconda.org/conda-forge/linux-64/tk-8.6.13-noxft_h4845f30_101.conda#d453b98d9c83e71da0741bb0ff4d76bc -https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda#04b88013080254850d6c01ed54810589 -https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.2-h659d440_0.conda#cd95826dbd331ed1be26bdf401432844 -https://conda.anaconda.org/conda-forge/linux-64/python-3.10.14-hd12c33a_0_cpython.conda#2b4ba962994e8bd4be9ff5b64b75aff2 -https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.7.1-hca28451_0.conda#755c7f876815003337d2c61ff5d047e5 -https://conda.anaconda.org/conda-forge/noarch/setuptools-69.5.1-pyhd8ed1ab_0.conda#7462280d81f639363e6e63c81276bd9e -https://conda.anaconda.org/conda-forge/noarch/wheel-0.43.0-pyhd8ed1ab_1.conda#0b5293a157c2b5cd513dd1b03d8d3aae -https://conda.anaconda.org/bioconda/linux-64/htslib-1.20-h81da01d_0.tar.bz2#1084947eefd2bbe9c1f84ca24061a9d5 -https://conda.anaconda.org/conda-forge/noarch/pip-24.0-pyhd8ed1ab_0.conda#f586ac1e56c8638b64f9c8122a7b8a67 -https://conda.anaconda.org/bioconda/linux-64/samtools-1.20-h50ea8bc_0.tar.bz2#7b3b1d0feea64e7e211ae24e7cd126d8 -https://conda.anaconda.org/bioconda/linux-64/lofreq-2.1.5-py310h47ef89e_10.tar.bz2#db192b837f2d571bf15493ff7a2ff421 +https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.6-ha6fb4c9_0.conda#4d056880988120e29d75bfff282e0f45 +https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.3-h659f571_0.conda#3f43953b7d3fb3aaa1d0d0723d91e368 +https://conda.anaconda.org/conda-forge/linux-64/python-3.12.5-h2ad013b_0_cpython.conda#9c56c4df45f6571b13111d8df2448692 +https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.10.1-hbbe4b11_0.conda#6e801c50a40301f6978c53976917b277 +https://conda.anaconda.org/conda-forge/noarch/setuptools-74.1.2-pyhd8ed1ab_0.conda#56c9c11d004428e81d02eeb730fc6336 +https://conda.anaconda.org/conda-forge/noarch/wheel-0.44.0-pyhd8ed1ab_0.conda#d44e3b085abcaef02983c6305b84b584 +https://conda.anaconda.org/bioconda/linux-64/htslib-1.21-h5efdd21_0.tar.bz2#06b995dc2244c024b45bbb3e53ae2f27 +https://conda.anaconda.org/conda-forge/noarch/pip-24.2-pyh8b19718_1.conda#6c78fbb8ddfd64bcb55b5cbafd2d2c43 +https://conda.anaconda.org/bioconda/linux-64/samtools-1.21-h50ea8bc_0.tar.bz2#4a7fe11223f61cb2d950ed54e20c12ce +https://conda.anaconda.org/bioconda/linux-64/lofreq-2.1.5-py312he57d009_12.tar.bz2#65c9936a7bab6a24e1fb3e766e93d88a diff --git a/bio/lofreq/indelqual/environment.yaml b/bio/lofreq/indelqual/environment.yaml index b986a10b53..5d738f7c7a 100644 --- a/bio/lofreq/indelqual/environment.yaml +++ b/bio/lofreq/indelqual/environment.yaml @@ -3,5 +3,5 @@ channels: - bioconda - nodefaults dependencies: - - samtools =1.20 + - samtools =1.21 - lofreq =2.1.5